Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq2401 86.0 1e-11 >seq2401 Length=3979 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35591 GAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGAT 35650 ||| || || || |||||||||||||| ||||||| | || || ||||| || || || Sbjct 167 GAATTCGAGTGTGACATGACCTTCCCATCCAGGTTCTAAGGGAGTAACGTTTACTATAAT 108 Query 35651 ACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCG 35710 ||||| | ||||| || |||||| | ||| | || || || || | || || || Sbjct 107 TCCACACCTTGCGTAAGTTGACTTACCAACACAAATGACCAGTACATTTCTTGGTATACG 48 Query 35711 GAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAAT 35755 || ||||| || |||| ||| || | ||||| || || ||||| Sbjct 47 AAAATATTCCACTGTGCTTGCAAGCACAAAGCTATTTGGTGGAAT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 824540678075760