Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_023557.1
Length=271084
Score E
Sequences producing significant alignments: (Bits) Value
seq71358 125 1e-23
seq102974 122 2e-22
>seq71358
Length=2301
Score = 125 bits (138), Expect = 1e-23
Identities = 117/146 (80%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 44625 TCATCTTCAAACACCTAGCCGTGATGCCTGATGTACAC-TGGGGAATGGGCGCGACCATT 44683
|||| || |||||||| ||||||||||||||||| ||| ||||||| ||| |||| |||
Sbjct 1 TCATTTTTAAACACCTTGCCGTGATGCCTGATGTGCACGTGGGGAAAGGG-TCGACGATT 59
Query 44684 GGTTCGGTTATTGCGACTAAAGGTGCGATTATTCCTGCCGCAGTGGGTGTTGATATTGGT 44743
|| || || |||| || ||||| || |||||||| || || || || |||||||||
Sbjct 60 GGGAGCGTGATCCCGACCAAGGGTGCCATCATTCCTGCGGCGGTTGGCGTGGATATTGGT 119
Query 44744 TGTGGGATGATTGCCCAACAAACCTC 44769
||||||||||||||| | |||| ||
Sbjct 120 TGTGGGATGATTGCCGTAAAAACGTC 145
>seq102974
Length=1575
Score = 122 bits (134), Expect = 2e-22
Identities = 100/122 (82%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 72256 AACCCAATCCCATGGATCAACTCCTGGTTGGTTTCTGACAACGTGCAAGTCGCTCCACAG 72315
|||||||||||||||||||| | ||| |||| ||||| ||||| ||||| || |||||
Sbjct 1501 AACCCAATCCCATGGATCAATGCATGGCTGGTGTCTGATAACGTACAAGTTGCGCCACAA 1442
Query 72316 GAAGTGGAAGTAAGTTCTTATCTGGTCGGTCAGATAGACTCGAAAGTGGACGCCAACGAT 72375
||||| ||||| ||||||||||| || ||||| || ||||| |||| || || |||||
Sbjct 1441 GAAGTTGAAGTCAGTTCTTATCTTGTTGGTCAAATTGACTCTCAAGTCGATACCGACGAT 1382
Query 72376 TT 72377
||
Sbjct 1381 TT 1380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 865895658442560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |