Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq5662 84.2 3e-11 >seq5662 Length=5517 Score = 84.2 bits (92), Expect = 3e-11 Identities = 137/193 (71%), Gaps = 12/193 (6%) Strand=Plus/Plus Query 51842 TGGAGACTTGGTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAATAGGCAACC 51901 ||| || ||||| |||| || || ||||||||| ||| |||| ||| | ||||| Sbjct 3953 TGGTGATATGGTTGAAAGGCATATGTGTGATGGTGATATTGTTTTATTTAATCGTCAACC 4012 Query 51902 AACACTTCATAAAGCTTCTATGCAAAGTTTTA--AAGTTAAAATTCAACCAGTAAAAACA 51959 || | |||||| ||| || || | ||| |||||||||||| || |||| Sbjct 4013 AAGTTTACATAAAATGAGTAT--AATGTGCCATCAAGCAAAAATTCAACCACAAAGAACA 4070 Query 51960 TTTAA----AATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGA 52015 ||| ||||||| | | || || | |||||||||| ||||||||||| ||||| Sbjct 4071 TTTCGTTTTAATGAATGCG--TTTG--TACACCATATAATGCAGATTTTGATGGTGATGA 4126 Query 52016 AATGAATTTACAT 52028 ||||||||||||| Sbjct 4127 AATGAATTTACAT 4139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634119282962320