Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq5662 84.2 3e-11
>seq5662
Length=5517
Score = 84.2 bits (92), Expect = 3e-11
Identities = 137/193 (71%), Gaps = 12/193 (6%)
Strand=Plus/Plus
Query 51842 TGGAGACTTGGTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAATAGGCAACC 51901
||| || ||||| |||| || || ||||||||| ||| |||| ||| | |||||
Sbjct 3953 TGGTGATATGGTTGAAAGGCATATGTGTGATGGTGATATTGTTTTATTTAATCGTCAACC 4012
Query 51902 AACACTTCATAAAGCTTCTATGCAAAGTTTTA--AAGTTAAAATTCAACCAGTAAAAACA 51959
|| | |||||| ||| || || | ||| |||||||||||| || ||||
Sbjct 4013 AAGTTTACATAAAATGAGTAT--AATGTGCCATCAAGCAAAAATTCAACCACAAAGAACA 4070
Query 51960 TTTAA----AATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGA 52015
||| ||||||| | | || || | |||||||||| ||||||||||| |||||
Sbjct 4071 TTTCGTTTTAATGAATGCG--TTTG--TACACCATATAATGCAGATTTTGATGGTGATGA 4126
Query 52016 AATGAATTTACAT 52028
|||||||||||||
Sbjct 4127 AATGAATTTACAT 4139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634119282962320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |