Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_023612.1
Length=39078
Score E
Sequences producing significant alignments: (Bits) Value
seq21713 82.4 2e-11
>seq21713
Length=22343
Score = 82.4 bits (90), Expect = 2e-11
Identities = 194/291 (67%), Gaps = 4/291 (1%)
Strand=Plus/Minus
Query 35680 TGAACGCTTGGAACACCGGAGAATTACATAAAATGGCGCTGCCGCCTTGTCATTTTGCCT 35739
||| ||||||||| | || | | ||||||||| || || ||||| |||| |
Sbjct 18515 TGACCGCTTGGAATCCAATCGACATTCCTAAAATGGCACTACCTCCTTGCCATTGTCTTA 18456
Query 35740 TTCAATTCAACGTCACCGATGGAAAATTAAATTGTATGGTTTACCAACG--CAGCGGAGA 35797
||||||| |||| | ||||| ||||| ||| | | || ||| | |||| |||
Sbjct 18455 TTCAATTTTACGTGGCTAATGGAGAATTATCATGTCAGTTGTATCAAAGATCAGC--AGA 18398
Query 35798 TATGTTTTTAGGGGTACCGTTTAACATCGCCGGTTATGCAGCTATAACCATGATGATTGC 35857
|||| | | || || || ||||| || || ||||||| | || ||||| ||
Sbjct 18397 TATGGGTCTTGGAGTGCCTTTTAATATAGCAAGTTATGCTTTGCTCACTTACATGATAGC 18338
Query 35858 CCAATTAACCAATTTAGAGCCGGGCGAGCTTGTCCATGCTATCGCAGACGCGCACATTTA 35917
|| | || |||||| |||| || || |||| || | | | || || || ||||
Sbjct 18337 TCACATCACAAATTTAAAGCCTGGAGATTTTGTGCACACCTTAGGCGATGCTCATGTTTA 18278
Query 35918 TTTAAATCACATCGAGCAAGTAAAGGAACAATTAAGCCGCGAGCCGCGACC 35968
||||||||| || |||| |||| || ||||| | || | ||| |||||
Sbjct 18277 TTTAAATCATATTGAGCCGCTAAAAGAGCAATTGAATCGTGTGCCACGACC 18227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124730255685120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |