Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_024369.2
Length=41569
Score E
Sequences producing significant alignments: (Bits) Value
seq30817 167 6e-37
>seq30817
Length=4284
Score = 167 bits (184), Expect = 6e-37
Identities = 218/302 (72%), Gaps = 0/302 (0%)
Strand=Plus/Plus
Query 38193 AATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGA 38252
|||||| |||||||| ||||| || || || | || ||| |||| || |||||||| ||
Sbjct 29 AATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACCTAGGGCAAGATCCTGA 88
Query 38253 GGTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGT 38312
| || ||| | || | |||||| || ||||||||| | || | ||||| |||||
Sbjct 89 AATCCGTTATATGCCTAACGGCGGAGCGGTGGCAAACCTGACTCTGGCAACTTCTGAAAG 148
Query 38313 TTGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTT 38372
|||||| || ||||||||||| || || ||||| || |||||||| || | |
Sbjct 149 TTGGCGTGACAAGCAAACCGGTGAGATGCGTGAAAAAACCGAATGGCACCGTGTGGTTAT 208
Query 38373 GTTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATAT 38432
|| || || | ||||||||||| || |||||||| |||||| || || || |||||
Sbjct 209 TTTCGGCAAATTAGCTGAAGTTGCAGGGGAATACCTGAAAAAAGGCTCACAAGTCTATAT 268
Query 38433 TGAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACACAAT 38492
||||| | | |||| || |||| ||| ||||||||||| || || || ||||
Sbjct 269 CGAAGGTTCGTTACAAACACGTAAATGGCAGGACCAAAGCGGTCAAGATCGCTATACAAC 328
Query 38493 AG 38494
||
Sbjct 329 AG 330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132688838341668
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |