Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq82763 109 1e-18
>seq82763
Length=7752
Score = 109 bits (120), Expect = 1e-18
Identities = 183/262 (70%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 182853 AATTGTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAATAAACATTACGATAGTGT 182912
|||| || |||||||| |||||||||||||||||| ||| |||||| |||| |||| | |
Sbjct 3998 AATTATACGAAGAGAATTATCGGATAATTTTTGTTTCTACAATAAAAATTATGATAATAT 4057
Query 182913 TCAGTCTACT-CACGCATGGGCTAGAAGAACATTAGAAGATCACGTTAATGATCCTAGAA 182971
| | | || | |||||| || ||| | | || || || ||| |||
Sbjct 4058 CAAAGGTGTTGCAAGT-TGGGCTTTAAAAACTCTTAATGAACATCGAAAAGATAAACGAA 4116
Query 182972 AGTATATCTATTCTATTAAACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATG 183031
||||| || | | | || | ||| || |||| ||||| ||| ||||||
Sbjct 4117 GTTATATTTACACAAAAGATGAATTAGAATGCTCAAAAACTCATGATGATCTCTGGAATT 4176
Query 183032 CATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGG 183091
|| | ||||| || || | |||||||||||||||| |||||||| ||||||| ||||
Sbjct 4177 CAGCTCAAATTCAATTGGTACAAGAAGGAAAAATGCATGGTTTTTTAAGAATGTATTGGG 4236
Query 183092 CTAAAAAGATACTTGAATGGAC 183113
|||| || || | ||||||||
Sbjct 4237 CTAAGAAAATTTTAGAATGGAC 4258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 901905958843840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |