Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_024451.1
Length=220222
Score E
Sequences producing significant alignments: (Bits) Value
seq78216 95.1 2e-14
>seq78216
Length=9244
Score = 95.1 bits (104), Expect = 2e-14
Identities = 160/225 (71%), Gaps = 5/225 (2%)
Strand=Plus/Plus
Query 140425 TACACACAAATAATATTGTTCACCGAGACATTAAACTCGGAAACATCATTTATGACACAA 140484
|| ||| ||| ||| | |||||| |||| | ||||| ||||| || || | | ||
Sbjct 5527 TAAACAGAAA-AATGTAGTTCACAGAGATTTGAAACTTGGAAATATTCTTGTAAATAAAA 5585
Query 140485 AGTTAAAAACTAGT-AAACTATCTAATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAAC 140543
| ||||| ||| ||| | | |||||| ||||||||||| | ||| | ||| |
Sbjct 5586 TCTGTAAAAC-AGTGAAAATTACAAATTTTGGTTTAGGAAAATATCTTGTTAATGATG-C 5643
Query 140544 GATCTT-TTAAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGG 140602
| ||| || | |||||| || | || |||||||| || || |||||| | || ||
Sbjct 5644 TAGCTTATTGCATGATCAAAAAGGTACACCTGCATATATATCACCTGATGTTGTTAGTGG 5703
Query 140603 TAAACCATATTTAGGTAAACCGTCTGATATGTGGGCGCTTGGAGT 140647
|||||||||| ||| ||||| |||||||||||||| | |||||
Sbjct 5704 TAAACCATATAAAGGAAAACCATCTGATATGTGGGCATTGGGAGT 5748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 703408442419680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |