Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq116239 82.4 7e-11
>seq116239
Length=11340
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513
||||| | ||||| || || || || |||||||| || || || | ||||| |
Sbjct 4573 AAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCCGACAATGTCCTACCA-TCCTCCAA 4631
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || |||| | || || || || || || |||||||||||||| |||
Sbjct 4632 TTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATGCCTTCCTTGTC-TTGAA 4690
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||||||| | | | |||| ||||| | ||||| || || | || | ||||| |
Sbjct 4691 TCTTTGCTTTAACATTTTCAATTGTGTCAGACGGCTCAACCTCCAATGTAATTGTTTTTC 4750
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || | ||||||||| |||||||||||
Sbjct 4751 CAGTTAAAGTTTTTACAAAAATCTGCAT 4778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482615336348560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |