Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq116239 109 1e-18
>seq116239
Length=11340
Score = 109 bits (120), Expect = 1e-18
Identities = 152/210 (72%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| ||||| | || |||||||| || || ||||| || ||
Sbjct 4781 AAAATG---CAGATTTTTGTAAAAACTTTAACTGGAAAAACAATTACATTGGAGGTTGAG 4725
Query 206224 AGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282
||||||||| | ||| || |||||||| ||||||||| || ||||| ||| ||
Sbjct 4724 CCGTCTGACACAATTGAAAATGTTAAAGCAAA-GATTCAAGACAAGGAAGGCATTCCACC 4666
Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342
|| ||| | | || || || |||||||| ||||| ||||| ||||| ||| | ||
Sbjct 4665 AGATCAACAACGTTTGATTTTTGCTGGAAAGCAATTGGAGGATGGTAGGACATTGTCGGA 4606
Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
||||||| | || || || || || |||||
Sbjct 4605 TTACAACATTCAAAAGGAATCCACACTTCA 4576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179802451721774
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |