Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_026014.1 Length=35814 Score E Sequences producing significant alignments: (Bits) Value seq31147 84.2 5e-12 >seq31147 Length=2015 Score = 84.2 bits (92), Expect = 5e-12 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 126 CAACTCAGCCACAGGATTAAAGCGCACAGCATCCTGTAGATAATCCGGTGCAAAATGGGC 185 ||||| ||| ||||||| | || ||||| | |||| ||| || || ||||||| Sbjct 1462 CAACTTCACCAAAGGATTATAAACCAGTGCATCATTAAGATGATCTGGGGCGAAATGGGA 1403 Query 186 ATAAGTCATCGTCTGCTGAATAGTGCTATGTCCAAGTATTCTCTGCAAAGTGATGATATT 245 ||| ||| ||| | |||| | |||| ||||| ||||| || || | ||||| Sbjct 1402 ATACCGCATTGTCATTTTAATATCGGTATGGCCAAGGATTCTTTGTAATACTAAAATATT 1343 Query 246 CCCACCATTAATCATGAAGTGAGTGGCAAAGGTATGCCGTAAAACATGTATCGACTGCCC 305 ||||| ||||| ||||||| ||||| || || |||||||||||| || || | Sbjct 1342 TCCACCTGACATCATAAAGTGAGATGCAAAAGTGTGGCGTAAAACATGTGATGATTGGCG 1283 Query 306 TTCAGG 311 |||||| Sbjct 1282 TTCAGG 1277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114301988406528