Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq83018 102 3e-18
seq63426 100 9e-18
seq63836 98.7 3e-17
seq67516 95.1 4e-16
>seq83018
Length=9708
Score = 102 bits (112), Expect = 3e-18
Identities = 73/83 (88%), Gaps = 1/83 (1%)
Strand=Plus/Plus
Query 2759 TGTGTTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCC 2817
||||| ||| || ||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 363 TGTGTGTATAAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCC 422
Query 2818 CTGGTTCAACCCCGGGCTTCAGC 2840
| ||||||| |||||| ||| ||
Sbjct 423 CCGGTTCAATCCCGGGTTTCGGC 445
>seq63426
Length=56070
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 29070 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 29129
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 29130 CCCGGGTTTCGGC 29142
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 32720 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 32779
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 32780 CCGGGTTTCGGC 32791
>seq63836
Length=10278
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 8793 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 8734
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 8733 CCGGGTTTCGGC 8722
>seq67516
Length=2739
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||| |
Sbjct 958 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAGAGGTCCCCGGTTCAATC 899
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 898 CCGGGTTTCGGC 887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15826492818630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |