Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq17062 87.8 2e-12 >seq17062 Length=43147 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 117723 CaaaaaaaaaaTGAATTAAGTGCAGCAGGATTTTATTATTTGGGTGTAGGTGATCAAGTA 117782 || ||| ||| |||||||||| || ||||| | ||| ||| | || |||| |||| Sbjct 6713 CAGAAACCAAAAGAATTAAGTGATGCTGGATTCTTTTACACAGGTATTGGAGATCGAGTA 6654 Query 117783 AAATGTTTTAGTTGTGGTGGAGGCCTAAAAGATTGGGA 117820 || ||||||||||| ||||||||| ||||||||||||| Sbjct 6653 AAGTGTTTTAGTTGCGGTGGAGGCTTAAAAGATTGGGA 6616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465348154511360