Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq21713 84.2 3e-11 >seq21713 Length=22343 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 146916 TTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTC 146975 ||| || ||||| | || || | || || || || || || | |||||||||||| || Sbjct 18253 TTTTAGCGGCTCAATATGATTTAAATAAACATGAGCATCGCCTAAGGTGTGCACAAAATC 18312 Query 146976 CCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTAT 147035 || ||||| | || | ||| || | |||||| ||||||| | || || ||||| Sbjct 18313 TCCAGGCTTTAAATTTGTGATGTGAGCTATCATGTAAGTGAGCAAAGCATAACTTGCTAT 18372 Query 147036 GTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC 147095 || || || || || || ||||| || | || || || |||| ||| || || | || Sbjct 18373 ATTAAAAGGCACTCCAAGACCCATATCTGCTGATCTTTGATACAACTGACATGATAATTC 18432 Query 147096 CCCGTCGGCCACGTAAAACTG 147116 || | ||||||||||| || Sbjct 18433 TCCATTAGCCACGTAAAATTG 18453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582515806881600