Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq131567 107 3e-18 >seq131567 Length=1176 Score = 107 bits (118), Expect = 3e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 |||||| | |||||||||||||| ||| || || ||||| ||| ||| ||| Sbjct 576 GCTAAAATGTATGGATATTGGATAGTAGTTAATTATAGAGAAGCTTACAATATGTTTGCC 517 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527 ||| ||| ||||| || || ||||| || ||||| || ||||| | ||| || ||||| Sbjct 516 TGTAATGGAATTCTTTTTAATCATGAATCTCCACGGCGTGGTGAAAATTTTGTTACCCGA 457 Query 161528 AAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGT 161587 || || ||| | | || ||| | | | | || | | | |||| Sbjct 456 AAAATAACTCGTTCGGTTGCCAAAATTTTTCTAAATCAATTAGAAGTTTTTGAGTTAGGA 397 Query 161588 AATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTG 161647 ||| || |||||| |||||||||||| ||||| |||||| ||||| ||||||||| || Sbjct 396 AATTTAGACTCAAAACGAGATTGGGGCCATGCCCGAGACTACGTGGAAGCTATGTGGATG 337 Query 161648 ATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGG 161691 ||| | |||||| | ||| | || ||||| || || || || Sbjct 336 ATGCTTCAACAGAATCGTCCACAAGATTATGTTATCGCAACTGG 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728713409548720