Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq131567 107 3e-18
>seq131567
Length=1176
Score = 107 bits (118), Expect = 3e-18
Identities = 194/284 (68%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467
|||||| | |||||||||||||| ||| || || ||||| ||| ||| |||
Sbjct 576 GCTAAAATGTATGGATATTGGATAGTAGTTAATTATAGAGAAGCTTACAATATGTTTGCC 517
Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527
||| ||| ||||| || || ||||| || ||||| || ||||| | ||| || |||||
Sbjct 516 TGTAATGGAATTCTTTTTAATCATGAATCTCCACGGCGTGGTGAAAATTTTGTTACCCGA 457
Query 161528 AAGATTACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGT 161587
|| || ||| | | || ||| | | | | || | | | ||||
Sbjct 456 AAAATAACTCGTTCGGTTGCCAAAATTTTTCTAAATCAATTAGAAGTTTTTGAGTTAGGA 397
Query 161588 AATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTG 161647
||| || |||||| |||||||||||| ||||| |||||| ||||| ||||||||| ||
Sbjct 396 AATTTAGACTCAAAACGAGATTGGGGCCATGCCCGAGACTACGTGGAAGCTATGTGGATG 337
Query 161648 ATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGG 161691
||| | |||||| | ||| | || ||||| || || || ||
Sbjct 336 ATGCTTCAACAGAATCGTCCACAAGATTATGTTATCGCAACTGG 293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 728713409548720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |