Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq21713 131 2e-25 >seq21713 Length=22343 Score = 131 bits (144), Expect = 2e-25 Identities = 295/434 (68%), Gaps = 12/434 (3%) Strand=Plus/Plus Query 31125 TGGAACACGAGTTAATTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATC 31184 ||| |||||| | ||||||||| || || || ||||| | ||||| ||| ||||| Sbjct 18232 TGGCACACGATTCAATTGCTCTTTTAGCGGCTCAATATGATTTAAATAAACATGAGCATC 18291 Query 31185 GCCAATAGAGTGTACCAATTCCCCTGGTCTTAGATGGGTCAATTTGGCAATCACATGA-- 31242 ||| | | ||| || || || || || ||| || || | | || |||| | | Sbjct 18292 GCCTAAGGTGTGCACAAAATCTCCAGGCTTTAAATTTGTGATGTGAGCTATCATGTAAGT 18351 Query 31243 -ACCAAAAGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCG 31301 | |||| |||||||| ||||| || || || || || | |||| ||| || |||| Sbjct 18352 GAGCAAA---GCATAACTTGCTATATTAAAAGGCACTCCAAGACCCATATCTGCTGATCT 18408 Query 31302 TTGATATAACAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACAC-ATGAC 31360 |||||| ||| ||| || | ||| | | |||||||||||| ||||| || ||| | Sbjct 18409 TTGATACAACTGACATGATAATTCTCCATTAGCCACGTAAAATTG-AATAAGACAATGGC 18467 Query 31361 AAGGCGGCAAAGCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAA-ACGC 31419 |||| || | ||||||| | | |||| |||||||||||| | | ||| || || Sbjct 18468 AAGGAGGTAGTGCCATTTTAGGAATGTCGATTGGATTCCAAGCGGTCA-TAATAATTCGT 18526 Query 31420 CGACTGGTTGGATCACGCTTAATCTCTTCTATCAC-GGCTGTTATTTGATCGATTCCTTC 31478 | | |||||| ||||| | || || || ||| ||| |||||| ||||| | Sbjct 18527 CTATCATTTGGATTGGTGTTAATTTGCTCGATGACTTGCT-TTAATTGATCAATTCCCTG 18585 Query 31479 ACCCGTATAATTACTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCC 31538 || |||||||| | |||| || || |||| || || || | ||||||||| || Sbjct 18586 TCCATCGTAATTACTGTGACATGTTTTATATTCTGCCCCTAAGTGCCTCCATTGAAAACC 18645 Query 31539 ATAAATAGGTCCCA 31552 ||| | ||| |||| Sbjct 18646 ATATACAGGGCCCA 18659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512162822900320