Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_027916.2
Length=160358
Score E
Sequences producing significant alignments: (Bits) Value
seq21713 131 2e-25
>seq21713
Length=22343
Score = 131 bits (144), Expect = 2e-25
Identities = 295/434 (68%), Gaps = 12/434 (3%)
Strand=Plus/Plus
Query 31125 TGGAACACGAGTTAATTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATC 31184
||| |||||| | ||||||||| || || || ||||| | ||||| ||| |||||
Sbjct 18232 TGGCACACGATTCAATTGCTCTTTTAGCGGCTCAATATGATTTAAATAAACATGAGCATC 18291
Query 31185 GCCAATAGAGTGTACCAATTCCCCTGGTCTTAGATGGGTCAATTTGGCAATCACATGA-- 31242
||| | | ||| || || || || || ||| || || | | || |||| | |
Sbjct 18292 GCCTAAGGTGTGCACAAAATCTCCAGGCTTTAAATTTGTGATGTGAGCTATCATGTAAGT 18351
Query 31243 -ACCAAAAGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCG 31301
| |||| |||||||| ||||| || || || || || | |||| ||| || ||||
Sbjct 18352 GAGCAAA---GCATAACTTGCTATATTAAAAGGCACTCCAAGACCCATATCTGCTGATCT 18408
Query 31302 TTGATATAACAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACAC-ATGAC 31360
|||||| ||| ||| || | ||| | | |||||||||||| ||||| || ||| |
Sbjct 18409 TTGATACAACTGACATGATAATTCTCCATTAGCCACGTAAAATTG-AATAAGACAATGGC 18467
Query 31361 AAGGCGGCAAAGCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAA-ACGC 31419
|||| || | ||||||| | | |||| |||||||||||| | | ||| || ||
Sbjct 18468 AAGGAGGTAGTGCCATTTTAGGAATGTCGATTGGATTCCAAGCGGTCA-TAATAATTCGT 18526
Query 31420 CGACTGGTTGGATCACGCTTAATCTCTTCTATCAC-GGCTGTTATTTGATCGATTCCTTC 31478
| | |||||| ||||| | || || || ||| ||| |||||| ||||| |
Sbjct 18527 CTATCATTTGGATTGGTGTTAATTTGCTCGATGACTTGCT-TTAATTGATCAATTCCCTG 18585
Query 31479 ACCCGTATAATTACTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCC 31538
|| |||||||| | |||| || || |||| || || || | ||||||||| ||
Sbjct 18586 TCCATCGTAATTACTGTGACATGTTTTATATTCTGCCCCTAAGTGCCTCCATTGAAAACC 18645
Query 31539 ATAAATAGGTCCCA 31552
||| | ||| ||||
Sbjct 18646 ATATACAGGGCCCA 18659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512162822900320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |