Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq69808 161 1e-34
>seq69808
Length=9325
Score = 161 bits (178), Expect = 1e-34
Identities = 478/728 (66%), Gaps = 13/728 (2%)
Strand=Plus/Minus
Query 118142 ATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGG 118201
||| || |||||||| ||||| | | || | |||||||||| | || || ||
Sbjct 7932 ATTAACTACAACAAATTCACCAGATAATACACGACGATGATAGATATTTGATGTATAAGG 7873
Query 118202 CTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCAT 118261
|||||| | || || ||||| || ||||| ||||| || ||||| ||||| ||||| ||
Sbjct 7872 CTCAAATGATTCGTTATTACCTAAAATTTGTGCTGTTGATGCTGTTGGCATTGGTGCAAT 7813
Query 118262 GAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT--CG 118319
| | || |||| ||| | || |||| ||| || || | | ||| | |
Sbjct 7812 TAACAAAGAATTTCGGATACCATGTTGTTTAATTTTTTCTTTAAGTTCATTCCAATTCCA 7753
Query 118320 TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGC 118379
||| | || || || | | |||||||||| | || || ||||||||| ||||
Sbjct 7752 TAGATCAG-TTGGTGTTTTATT-CCACATATCATATTGAAGTATACCTTGGCTAACTGGT 7695
Query 118380 GATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGG 118439
||||| ||| |||| ||||||| || | | || || |||||| | || ||||| |
Sbjct 7694 GATCCATCATATGTTTCATATGAACCATATAATTCAGCTAATTCGCAACTAGCCTCTAAT 7635
Query 118440 GCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 118499
|| | | ||| ||||||||||| || | ||| | | || || || || |||
Sbjct 7634 GCACCATAATAAATTGTTTCAAATATTTGTTGATTTAATTTCTGTGCTTCTTCACTTTCA 7575
Query 118500 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 118559
| | | || ||||||||| |||| || | ||||| || || | ||||||||
Sbjct 7574 TATGGGTAACGCATTAAAATAAATGCATCAGCTAAGCCTTGTACGCCAATACCAATTGGT 7515
Query 118560 CGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAAC 118618
||||| | | ||| || || || ||| | |||||| |||| |||| ||||
Sbjct 7514 CGATGACGAAAATTTGATTTTTTTGCT-TCTGGTAAAGGATAATAATTAATATCAATAAT 7456
Query 118619 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 118678
|||| | |||| | || |||| ||||| | ||| | ||| |||| ||||| | |
Sbjct 7455 TTTATTCAAATTTCTTGTAACAATTTTTGTAACTTCTTTAAGTTTTTTAAAATCATATTT 7396
Query 118679 GCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 118738
| ||| | | ||| || || | || ||||| || | |||||| |||| |
Sbjct 7395 TTTA---TCTGCTGTAACAAACATATTTAAAGCAATTGAAGCTAAATTACAAACAGCTAT 7339
Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798
||||| | | || || | |||||| || |||| || || |||||||||||
Sbjct 7338 TTCATCTGGTGCTGAATATTCAACAATTTCTGTACACAGATTACTACATTTAATGGTGCC 7279
Query 118799 CAAGTTCTTTTGATTTGACTTTGTG--TTACACGCATCCTTGTAAAGCATGTATGGCGTC 118856
| ||| | |||||| ||||| | ||||||||||| || || | ||| ||||| ||
Sbjct 7278 AATGTTTTGTTGATT--ACTTTTTCGATTACACGCATCTTTATATAACATATATGGAGTA 7221
Query 118857 CCCGTCTC 118864
|| || ||
Sbjct 7220 CCAGTTTC 7213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 617404778730640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |