Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq21713 170 1e-37
>seq21713
Length=22343
Score = 170 bits (188), Expect = 1e-37
Identities = 234/327 (72%), Gaps = 0/327 (0%)
Strand=Plus/Plus
Query 111609 CAATTCAAAGTCATCAGCAACAAAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAG 111668
|| |||||| |||||| | |||||| || ||||| ||||| ||||||| || | ||
Sbjct 18157 CATTTCAAAATCATCAAAAGTAAAATCTTCTATGCATTCAACTTTTCGTTTTATAATGAG 18216
Query 111669 TTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAA 111728
|||||||| || ||| || | | || || || |||| || ||||||||
Sbjct 18217 CTTTGGAAAAGGTCGTGGCACACGATTCAATTGCTCTTTTAGCGGCTCAATATGATTTAA 18276
Query 111729 ATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTG 111788
||||||||| ||||| |||| || | || || | ||||| ||| ||||||||
Sbjct 18277 ATAAACATGAGCATCGCCTAAGGTGTGCACAAAATCTCCAGGCTTTAAATTTGTGATGTG 18336
Query 111789 TGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCAT 111848
|| |||||||| ||||| | | ||||| || || ||||| ||||| || || |||||
Sbjct 18337 AGCTATCATGTAAGTGAGCAAAGCATAACTTGCTATATTAAAAGGCACTCCAAGACCCAT 18396
Query 111849 ATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACA 111908
|||| | ||||||||||| | ||||||||||| || | | ||| |||||||||
Sbjct 18397 ATCTGCTGATCTTTGATACAACTGACATGATAATTCTCCATTAGCCACGTAAAATTGAAT 18456
Query 111909 AAGTACATGACAAGGAGGCAATGCCAT 111935
||| ||| |||||||| | ||||||
Sbjct 18457 AAGACAATGGCAAGGAGGTAGTGCCAT 18483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391308876288922
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |