Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq21713 107 2e-18 >seq21713 Length=22343 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126162 GTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTT 126221 || || |||||||||||||| ||||| ||||| || || | | ||||| || |||| Sbjct 18350 GTGAGCAAAGCATAACTTGCTATATTAAAAGGCACTCCAAGACCCATATCTGCTGATCTT 18409 Query 126222 TGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAA 126281 ||||| || ||||| ||||| || | ||||||||||||| | |||||| Sbjct 18410 TGATACAACTGACATGATAATTCTCCATTAGCCACGTAAAATTGAATAAGACAATGGCAA 18469 Query 126282 GGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTCGA 126341 || |||| ||||||| | || || | |||||||| || | | ||| |||| | Sbjct 18470 GGAGGTAGTGCCATTTTAGGAATGTCGATTGGATTCCAAGCGGTCATAATAATTCGTCTA 18529 Query 126342 GAGTTTGGATTGGTTTTAATTTGTTGTATAACTGATTTTAATTGATC 126388 ||||||||||| |||||||| | || ||| ||||||||||| Sbjct 18530 TCATTTGGATTGGTGTTAATTTGCTCGATGACTTGCTTTAATTGATC 18576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407934623471858