Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq30817 125 5e-24
>seq30817
Length=4284
Score = 125 bits (138), Expect = 5e-24
Identities = 241/353 (68%), Gaps = 2/353 (1%)
Strand=Plus/Minus
Query 44702 GCGAGCGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACG 44761
|||| | || | ||||||||| | |||||| | || | | ||| || || || ||
Sbjct 377 GCGACCACCTAACATTTGCATTGAGCCGCCAATATTCACAACCACTTCTGTTGTATAGCG 318
Query 44762 TTCTACACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTG 44821
||| |||| | || ||| ||||| |||| | |||||||| ||||| ||
Sbjct 317 ATCTTGACCGCTTTGGTCCTGCCATTTACGTGTTTGTAACGAACCTTCGATATAGACTTG 258
Query 44822 AGAACCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTT 44881
|| |||||| | || || | |||| |||||| | ||| ||||| | ||| ||
Sbjct 257 TGAGCCTTTTTTCAGGTATTCCCCTGCAACTTCAGCTAATTTGCCGAAAATAACCACACG 198
Query 44882 ATGCCATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTCGT 44941
|||||||| |||| || | | || ||||||||||| ||||| |||| ||
Sbjct 197 GTGCCATTCGGTTTTTTCACGCATCTCACCGGTTTGCTTGTCACGCCAACTTTCAGAAGT 138
Query 44942 TGCGATGCTGAGTCTTCCGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGTCTTG 45001
||| | | || || | ||||||||||| || || ||||| | ||| || || |||||
Sbjct 137 TGCCAGAGTCAGGTTTGCCACCGCTCCGCCGTTAGGCATATAACGGATTTCAGGATCTTG 78
Query 45002 CCCCAGGGTACCAATCAGGATGACTTTGTTTACACCGC-GTTGTGCCATTTAT 45053
||| ||| |||| || || || ||||| ||||| || | | || |||||||||
Sbjct 77 CCCTAGGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTG-GCCATTTAT 26
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330361647424804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |