Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_031250.1 Length=52437 Score E Sequences producing significant alignments: (Bits) Value seq69617 96.9 1e-15 >seq69617 Length=1534 Score = 96.9 bits (106), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 17453 TAGGTCCTGGCGCATCTGCTTTTATCTGGAACCGTTGGGATAACTTTAAATACGGTGTAC 17512 |||| ||| |||| |||| | | ||||||| ||||||||||| | ||||||||| Sbjct 876 TAGGGCCTAGCGCTGCTGCCTATGTCTGGAATCGTTGGGATAATCTGGAATACGGTGACG 817 Query 17513 CTGATACGTTTACCATGTATCACTGGGGTAATGGTAGTGCATGGTCAGGTTACCAGCCTC 17572 | |||||||||| | | || |||||| ||| ||||||||||||||| || |||| Sbjct 816 CAGATACGTTTATTTTCAAGCATTGGGGTGATG---ATGCATGGTCAGGTTATCAACCTC 760 Query 17573 GTGCTTATTTCTCCGCAGCACGTGGATGGTATGAGCT 17609 |||| | | || || ||| | | |||| ||||||| Sbjct 759 GTGCCTTTGCTTCAGCGGCAAGAGCATGGAATGAGCT 723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167411390052372