Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq116239 84.2 5e-11
>seq116239
Length=11340
Score = 84.2 bits (92), Expect = 5e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | |||||| || || || ||||| ||||||||||| | || || || |||||
Sbjct 4567 AGAACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCCGACAATGTCCTACCATCC 4626
Query 151953 TCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| | ||||| || || || || | | || || || | | || |||||||| |
Sbjct 4627 TCCAATTGCTTT--CCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATGCCTTCCTTGT 4684
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
||||||| ||| ||| ||| | || | |||| || ||| || || | ||||| |
Sbjct 4685 CTTGAATCTTTGCTTTAACATTTTCAATTGTGTCAGACGGCTCAACCTCCAATGTAATTG 4744
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|||| || || | ||| || || || | |||||||||
Sbjct 4745 TTTTTCCAGTTAAAGTTTTTACAAAAATCTGCATTTT 4781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151850270944274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |