Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_031924.1
Length=47564
Score E
Sequences producing significant alignments: (Bits) Value
seq30817 89.7 2e-13
>seq30817
Length=4284
Score = 89.7 bits (98), Expect = 2e-13
Identities = 188/278 (68%), Gaps = 13/278 (5%)
Strand=Plus/Minus
Query 36521 CCATTTACGAGTACGAAGCTGGCCTTCGATGTAAACCTGCGAACCTTTTCGAAGGTATTC 36580
||||||||| || | | | |||||||| || || || || |||||| ||||||||
Sbjct 296 CCATTTACGTGTTTGTAACGAACCTTCGATATAGACTTGTGAGCCTTTTTTCAGGTATTC 237
Query 36581 TCCTGCAACTTCCGCAAGTTTCCCGAATATGACAATACGATGCCACTCTGTCTGTTCTTT 36640
||||||||||| || | ||| ||||| || || | ||| ||||| || || | |||
Sbjct 236 CCCTGCAACTTCAGCTAATTTGCCGAAAATAACCACACGGTGCCATTCGGTTTTTTCACG 177
Query 36641 CTTTTCTCCTGTCTGCTTATCTTTCCACTGCTCAGATGTTGCAACGGAAATGTTGACAAT 36700
| | || || || ||||| || ||| ||||| ||||| | | | ||| | |
Sbjct 176 CATCTCACCGGTTTGCTTGTCACGCCAACTTTCAGAAGTTGCCAGAGTCAGGTTTGCCAC 117
Query 36701 TGCAGAACC-TGATGCTGAATATTTAAC----TTCAGGGTCGTTTCCGAGAGTTCCGACA 36755
|| || | | || || |||| |||||| || | || || | |||| |
Sbjct 116 CGCTCCGCCGTTAGGC-----ATATAACGGATTTCAGGATCTTGCCCTAGGTTACCGATA 62
Query 36756 ATAATTACTTTATTTACGCC---GCGTGCCATTTATTA 36790
| |||||||||||||||||| || |||||||||||
Sbjct 61 AGAATTACTTTATTTACGCCTCTGCTGGCCATTTATTA 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151842472635528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |