Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2384 91.5 1e-13 >seq2384 Length=141650 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| || || |||| | || || || || |||||||| ||||| || || || || Sbjct 71183 GTGACATGTGCTATCATGCAGGTGAGCAGAGCATAGCTGGCAATGTTGAAGGGCACTCCC 71242 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAA 21116 ||||||||||| || |||| |||||||| ||| ||| ||| || |||||| || Sbjct 71243 AGGCCCATGTCCGCAGACCGCTGGTACAACTGACAGCTGAGCGTACCGTCAGCCACATAG 71302 Query 21117 AACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCAC 21176 ||||| || ||| || || || || ||||| | | | ||| | ||||||||| Sbjct 71303 AACTGTGCCAGGCAGTGGCAGGGTGGCAGTGCCATTTGTGGCACATCCACAGGGTTCCAC 71362 Query 21177 GCGCACAT 21184 || ||||| Sbjct 71363 GCACACAT 71370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427456046277600