Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq154 96.9 4e-15 >seq154 Length=1683969 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||||| |||| || || || | || || ||||| || |||||||| || | Sbjct 580023 CCTCCTCGTAGTCGCAGGACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 579964 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | ||||| ||||| |||||||| |||| || || ||||| || ||||| Sbjct 579963 AGGGTACGGCCATCTTCCAGTTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGAGGA 579904 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || |||||| || | | || | || || | || || ||| Sbjct 579903 ATTCCTTCCTTATCTTGAATTTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCAACT 579844 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | ||| | || || ||||||||||| || ||||| || |||||| || Sbjct 579843 TCCAAAGTGATGGTTTTACCGGTCAATGTCTTCACGAAAATCTGCATACCT 579793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506625456578400