Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq154 91.5 1e-13 >seq154 Length=1683969 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| | || | ||||| || || ||| |||||| || || || || || Sbjct 580024 ACCTCCTCGTAGTCGCAGGACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 579965 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | ||| |||| |||| ||| || || || || || | || |||||||| |||| Sbjct 579964 CAGGGTACGGCCATCTTCCAGTTGCTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGAGG 579905 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||| |||||| |||||| ||||| | ||| ||||| | ||||| || Sbjct 579904 AATTCCTTCCTTATCTTGAATTTTGGCCTTGACATTCTCAATGGTATCAGATGGCTCAAC 579845 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| || || ||||| Sbjct 579844 TTCCAAAGTGATGGTTTTACCGGTCAATGTCTTCACGAAAATCTGCAT 579797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354512245202760