Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq811 134 2e-26 >seq811 Length=1020237 Score = 134 bits (148), Expect = 2e-26 Identities = 212/299 (71%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||||||| ||||| |||| || || | | | || || ||| || ||| Sbjct 490634 CCATGAGTTAAATGTCCACCACAATTCAGTGATAATCCAAGTATTGTATCACCCGGAGCA 490693 Query 6986 AGCAACGCATGGTAAACA--GCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTG 7043 |||| || | | ||||| ||||| |||||||| ||||| |||||||||||||| |||| Sbjct 490694 AGCAGCGAA--GCAAACACTGCTTGATTTGCCTGAGAACCAGAATGGGGTTGAACATTTG 490751 Query 7044 CGAAATTGCAACTAAACAG-TTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCG 7102 | || || | |||||| || ||| | ||| || ||||| || || | ||||| Sbjct 490752 CAAATTTAACATCAAACAGCTTGCAAAGC-CTCTCTATAGCCAGATTTTCAACTTCATCC 490810 Query 7103 GCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTA 7162 | | |||| || | |||||| | ||| || ||||| || || ||||| || || || Sbjct 490811 ACATACTCACAGCCACAGTAATATCTTTTACCAGGATAACCTTCTGCATATTTATTAGTC 490870 Query 7163 AAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCAA 7221 | || |||||||||||||| ||| || | | || | ||||| ||||||||||| Sbjct 490871 AGAAAAGAACCTTGCGCTTCCATCACTGCTTTACTTGCAAAATTTTCCGATGCAATCAA 490929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552929108619600