Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq63 93.3 4e-14 seq907 86.0 6e-12 >seq63 Length=2369799 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| || || || || ||||| | |||||| |||||| | || |||||||| | Sbjct 1387648 AAACACACGACGATCTGTGGAACTCGGCTCAGATACAGCTGGTCCGGGAAGGTAAAATGC 1387589 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | |||| | | || |||||||||||||| ||||| || |||||||| | || || Sbjct 1387588 ATGGATTCTTGCGAATGTACTGGGCCAAGAAGATACTGGAGTGGACAGCTTCGCCTGAAG 1387529 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 |||| | | | ||||||| || || || ||||| || | ||||| | ||||||| Sbjct 1387528 AGGCTTTAGCTTCAGCTATTTACCTCAATGACAGATATAGCATGGACGGCAGAGATCCTA 1387469 Query 71850 ACGGTTATGTCGGT 71863 |||||| || ||| Sbjct 1387468 GCGGTTACGTTGGT 1387455 >seq907 Length=523837 Score = 86.0 bits (94), Expect = 6e-12 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 147469 ACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCGT 147528 ||||||| || || |||| |||| || | |||||||| | |||||||| ||||||| Sbjct 405408 ACTCGCCTGAGAGCACTCGTCGTGAATAGATGTTACTAGTGTAAGGCTCGAAGGACTCGT 405349 Query 147529 TGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTGC 147588 | || || ||||||||||| || | ||| || |||||| ||| | || || || || | Sbjct 405348 TATTGCCAAGAATCTGTGCGGTAGATGCAGTGGGCATGGGAGCCAGTAACAACGAGTTTC 405289 Query 147589 GTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATC 147640 ||| || ||| | || || | ||| || | |||||| ||| || || Sbjct 405288 GTACACCATGCTTTGCGATCTTAGCCTTGAGAGCAGCCCAGTCCCACAGGTC 405237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478295206106400