Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_008206.2 Length=78296 Score E Sequences producing significant alignments: (Bits) Value seq49429 176 2e-39 >seq49429 Length=1101 Score = 176 bits (194), Expect = 2e-39 Identities = 225/309 (73%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 49033 CCGAGCTGCGATTCACCCCGAGTGGCGCGGCTGTCGCAAACTTCACGGTCGTGTCCAATG 49092 |||| || ||||||||||| || ||||| ||||| |||||||| |||| ||||| | Sbjct 1 CCGAACTTCGATTCACCCCCGCCGGTGCGGCGGTCGCGAACTTCACCGTCGCGTCCACTC 60 Query 49093 ACCGT---TTC---CTCAAGGATGGGGAGTGGCAGGATAAGGACCCCGTGTTCCTCCGCT 49146 ||| ||| | | || |||||| |||| ||| | |||||||||||| Sbjct 61 CCCGCACCTTCGATCGCCAGACCAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCGCT 120 Query 49147 GCAACGTGTGGCGTGAGTACGCTGAGAACGTCGCTGAGTCGCTGACACGCGGCACCACCG 49206 ||||| | ||||||||| || ||||||||||| ||||| ||||| |||||| | | Sbjct 121 GCAACATCTGGCGTGAGGCAGCGGAGAACGTCGCCGAGTCCCTGACTCGCGGCGCACGGG 180 Query 49207 TGATCGTCACCGGCAAGCTCTCGCAGCGGAACTTCGAGGACCGCGAGGGGAACAAGCGCA 49266 || ||||||| ||| |||| |||||| ||||||| || ||||| | ||||||| Sbjct 181 TGGTCGTCACGGGCCGGCTCCGGCAGCGTTCCTTCGAGACGCGTGAGGGTGAGAAGCGCA 240 Query 49267 CCGTCGTGGAGCTGGAGGTCGATGAGATCGGACCCGCTCTGCGTTTCGCCACGGCGAAGG 49326 | ||||| || || |||||||| ||| |||| || | || || | ||| ||||| |||| Sbjct 241 CTGTCGTCGAACTCGAGGTCGACGAGGTCGGCCCTTCGCTCCGCTACGCGACGGCCAAGG 300 Query 49327 TGAGCAAGG 49335 | | ||||| Sbjct 301 TCAACAAGG 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 250235097348490