Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_008584.1 Length=152372 Score E Sequences producing significant alignments: (Bits) Value seq811 86.0 6e-12 >seq811 Length=1020237 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/217 (70%), Gaps = 16/217 (7%) Strand=Plus/Minus Query 12038 AATTTAGCCTTTCTCATTGGAGGAGCGAACTTGTTTTTCTCGACTTTTACATGAACTTCA 12097 ||||| |||| ||| | ||||||||||| || ||||| | ||||| || |||| Sbjct 408321 AATTTTGCCTCTCTAAATGGAGGAGCGACTTTATTTTTTACAACTTTAACTCTCGTTTCA 408262 Query 12098 TCTCC---AATTTCTCCATCTTCGTCTTTTATCGG-----CTTTTTGCGCATATTAAGTC 12149 | || ||| | || |||| || ||||||| ||||| | |||| ||||| Sbjct 408261 TTACCCGTAATAT-TC--TCTTTATCCTTTATCGCACCAACTTTT--CTTATATCAAGTC 408207 Query 12150 TAAGAGAGGAGAAAAATTTTAAAGCTCTACCACCTGGAGTGGTTTCTGGATTTCCATA-- 12207 | | ||| | | |||||||| || | ||||| | || ||||| ||||||||||| Sbjct 408206 TTATAGAAGTATAGAATTTTAACGCATTTCCACCAGTGGTAGTTTCAGGATTTCCATATA 408147 Query 12208 -AACTCCTATTTTTTCACGAATTTGGTTAATAAACAT 12243 ||||||||||| |||||||||||| ||||| || Sbjct 408146 CTACTCCTATTTTCATACGAATTTGGTTGATAAATAT 408110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487088455406400