Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq254 131 3e-25 seq907 127 4e-24 >seq254 Length=3229631 Score = 131 bits (144), Expect = 3e-25 Identities = 167/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| || || |||||||| ||||| || || || ||||| | | Sbjct 2115974 CTGTTCAACGCCATCGAAACAATGCCCTGTGTCAAGCGCAAAGCTGATTGGGCATTGCAG 2115915 Query 42669 TGGATCGAGAGTCCCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||||| || | ||| |||||||| || ||| | | ||||| || | || ||||| Sbjct 2115914 TGGATCGCCAG-CGAGACCGCAACGTTTGGTGAGCGTATTGTAGCGTTCGCTGCAGTCGA 2115856 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGA 42786 ||| ||||||||||| || |||||| |||||||||||||||||| || || || | Sbjct 2115855 GGGTATCTTCTTCTCCGGTAGCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTC-A 2115797 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 |||||||||| |||||| || ||||| ||| | ||||||| Sbjct 2115796 TGCCCGGACTAACCTTCAGCAATGAACTGATCTCACGTGACGAGG 2115752 >seq907 Length=523837 Score = 127 bits (140), Expect = 4e-24 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTG 244765 ||||| ||| ||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct 396422 ACCTCATCCTTACTGGTGTACTCGACAATCTCTGTGCAGAGGTTGCTGCACTTGATGGTC 396363 Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825 || |||| ||| |||||| |||| ||||||||| ||||| || | |||| | || | Sbjct 396362 CCAAGGTTCTGCTGATTGCTCTTGCGGTTGCAGGCATCCTTATATAACATGTACGGAACA 396303 Query 244826 CCGGTCTCGAGCTGGGCGACGAGGA 244850 || ||||| | ||||||| | |||| Sbjct 396302 CCAGTCTCTACCTGGGCGTCCAGGA 396278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943614773791200