Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_009237.1 Length=37446 Score E Sequences producing significant alignments: (Bits) Value seq53854 80.6 6e-11 >seq53854 Length=1476 Score = 80.6 bits (88), Expect = 6e-11 Identities = 159/232 (69%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 25576 ACGGCGTCCTTCAACCCCTTGCCGGCCTTGAACTTCGGCGCTTTCGACGCTGGAATCTTG 25635 ||||| | ||||| || |||| |||||||| ||| || || || | || || Sbjct 1048 ACGGCCTTCTTCAGGCCGGTGCCCGCCTTGAAGGCCGGGGCCTTGCTGGCGGCGATGGTG 989 Query 25636 ATTTCTTCGCCGGT-TGCGGGATTGCGTCCGGTGCGGGCGGCCCGCGCGCCCACGCTGAA 25694 || || | ||||| |||||| ||||| ||||||||||| || || ||| || ||| Sbjct 988 ATCTCGGCACCGGTCTGCGGG-TTGCGGCCGGTGCGGGCCGCGCGGTCGCGGACCTCGAA 930 Query 25695 TACGCCGAATCCCGTCAGCGTCACCGTGTCGCCCTTGCGCAGCGACTTC----GTGATGC 25750 |||||| |||| ||||| ||| | ||||||||| |||| || |||||| Sbjct 929 GGTGCCGAAGCCCGGCAGCGCGACCTTCTCGCCCTTG----GCGAGCTCGGCGGTGATGG 874 Query 25751 CTTCGAGAACGGCTTCCAGCGCAAAGCCGGAGTCGGCTTTCGTCAGGCCCGT 25802 | ||||| ||||| || || | |||||||||| | || ||||| || Sbjct 873 CGTCGAGGACGGCGCTCACGGCCTTGTCGGAGTCGGCCTGGGTGAGGCCGGT 822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119618362299520