Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2384 111 1e-19 >seq2384 Length=141650 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 ||| | || ||||| || | ||| | || | || | ||||||||||||||| || || Sbjct 71177 AGATCGGTGACATGTGCTATCATGCAGGTGAGCAGAGCATAGCTGGCAATGTTGAAGGGC 71236 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||||| |||||||| | |||| ||| |||| ||||||| ||| ||||||||| Sbjct 71237 ACTCCCAGGCCCATGTCCGCAGACCGCTGGTACAACTGACAGCTGAGCGTACCGTCAGCC 71296 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||||| || || | |||| ||||| || || ||||| | || ||| | ||| Sbjct 71297 ACATAGAACTGTGCCAGGCAGTGGCAGGGTGGCAGTGCCATTTGTGGCACATCCACAGGG 71356 Query 20417 TTCCACGCACACAT 20430 |||||||||||||| Sbjct 71357 TTCCACGCACACAT 71370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441034211890800