Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_011271.1 Length=155372 Score E Sequences producing significant alignments: (Bits) Value seq13874 102 8e-17 >seq13874 Length=14992 Score = 102 bits (112), Expect = 8e-17 Identities = 112/147 (76%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 115022 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 115081 ||| ||||| ||||| || |||| || || || || |||||| |||||||||||| Sbjct 10270 CGGACCGGGTCGTGGATCGGCCGCCGGGTCCCTCGTGGCCTACGCGATGGGCATCACCAA 10329 Query 115082 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC--CCC 115139 ||||||||| || | ||| ||| | |||||||||||| ||||||| || ||| | Sbjct 10330 CATCGACCCGCTCCCGCACGGACTGCTCTTCGAGCGCTTCCTCAACCCCGAGCGCGTGTC 10389 Query 115140 GACTTCCCCGACATCGACGTCGACTTC 115166 || | |||||||||||| |||||||| Sbjct 10390 GA--TGCCCGACATCGACATCGACTTC 10414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496681091006400