Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq907 111 3e-19 >seq907 Length=523837 Score = 111 bits (122), Expect = 3e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTG-CTCACGTTGGGGTCGGCCATGTGAATGT 203975 ||| || |||||||||||||| ||||| ||| | ||| ||| || || ||||||| | Sbjct 411999 CCAGCCATACATGTGCATGGAGGACAGCTTGGCGTACGA-GGGCTCAGCAATGTGAACAT 411941 Query 203976 TCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCT 204035 | || || || ||||||||||||| | || ||||| ||||| |||| ||||| | Sbjct 411940 TTAGCGATTGTGACTGGTCGATGAAAGCTCCTCGGTCTGCCGCCATCTTGAGTATGGTTT 411881 Query 204036 TCTGCGAAATCTCCCACACCGTCTTGAACA 204065 ||||||| ||||||||||| |||||| ||| Sbjct 411880 TCTGCGATATCTCCCACACAGTCTTGTACA 411851 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAG--GTTGTTGGTGAATGGTTCGAAC 204253 ||| || || || || ||||| | ||| |||| || ||| | ||| | || ||||| Sbjct 405413 CTGGAACTCGCCTGAGAGCACTCGTCG--TGAATAGATGTTACTAGTGTAAGGCTCGAAG 405356 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 | |||||| ||||| | |||||| ||||| || ||||||||||||||||| | || Sbjct 405355 GACTCGTTATTGCCAAGAATCTGTGCGGTAGATGCAGTGGGCATGGGAGCCAGTAACAAC 405296 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 ||||| || ||||| | ||| || | | ||| |||| | |||||| || | Sbjct 405295 GAGTTTCGTACACCATGCTTTGCGATCTTAGCCTTGAGAGCAGCCCAGTCCCACAGGTCG 405236 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGAT 204408 ||||| |||| ||||||||||| |||| | ||| Sbjct 405235 GTGGGTGTCACTCCCCACATGTCATACTGCAGGAT 405201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794545216567200