Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1654 84.2 2e-11 >seq1654 Length=165633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 86611 ATGTTTTTGTTTTCTTCTAATATTATGTCTGAATCATATACATTAAAAGAAGTAAGACAT 86670 |||||| | ||| |||||| ||||| || ||||| ||||| || ||||| |||||| | Sbjct 110141 ATGTTTCTCTTTGGTTCTAAAATTATTTCAGAATCTTATACCTTGAAAGAGGTAAGAGAC 110200 Query 86671 ATTTGGTTCATGACCATTCCTGATACGTTTTCTCAATATA-ATCAAATTCTTGGAAGATC 86729 |||||| | |||||||||||||| | | || || ||| | ||||| | || | Sbjct 110201 CTTTGGTACTTGACCATTCCTGATTCCATGTCAGAA-ATACAGCAAATAAACGCTAGGTG 110259 Query 86730 TATAAGAAAGTTTTCGTATAATAATATATCTGAACCAGTTGAAGTATACTTATTAGCAGC 86789 | ||||||| ||||| || || ||| | | ||| ||| || ||| | |||| ||| Sbjct 110260 TTTAAGAAACTTTTCTTACAAAGATAAAACGATACCTGTTCTTGTTTACATGTTAGTAGC 110319 Query 86790 TGT 86792 || Sbjct 110320 AGT 110322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561677592286800