Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq8480 118 4e-22 >seq8480 Length=73609 Score = 118 bits (130), Expect = 4e-22 Identities = 204/293 (70%), Gaps = 25/293 (9%) Strand=Plus/Plus Query 36097 CTGTTCG-GCAAGGT-CCGCACCGGCCGCGTCCGCGTCCTGTTCGGCTCCACGGCTAAGA 36154 ||||||| || ||| ||||||||| || || || | ||||| ||||| | |||| Sbjct 68288 CTGTTCGAGC--GGTGCCGCACCGGACGGGTGTCGGTGATCTTCGGGTCCACCGAGAAGA 68345 Query 36155 TGGGTGCCGGCATGAACGTGCAAAACAGGCTGGTGGCTCTCCACCACCTCGACGCACCAT 36214 |||| |||||| ||| | || || || | | || || |||||| |||||| || | Sbjct 68346 TGGGCACCGGCACCAACATCCAGGACCGGGCGATCGCCCTGCACCACGTCGACGTGCCGT 68405 Query 36215 GGCGCCCGTCTGACCTCGAACAGCGCGAGGGCCGCATCATCCGTCAGGGTAACGAGCTGT 36274 |||| ||| | ||||||||||| || || || ||||||||||||||||| ||| | | Sbjct 68406 GGCGACCGGCCGACCTCGAACAACGAGAAGGTCGCATCATCCGTCAGGGCAAC---CAGA 68462 Query 36275 ACGACCGCGACCCGGAAGGCTTCGAGGTGCGCATCAACCGCTACGCCACGAAACAGACCC 36334 | | || || || ||||| |||| ||||| | || | ||||| Sbjct 68463 ATGCCCACG------------TCCAGGTG---TTCAA---CTACGTCGCGGAGAAGACCT 68504 Query 36335 TCGACAGCCGCATGTGGCAGACGATCGAGAGCAAGGCGAACTTCATCGAGCAG 36387 |||||| | ||||||||| ||| | | |||| ||| |||||||||||||| Sbjct 68505 TCGACACCGTCATGTGGCAAACGGTGCACCGCAAAGCGCACTTCATCGAGCAG 68557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194021699927440