Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq8413 122 1e-22 >seq8413 Length=18529 Score = 122 bits (134), Expect = 1e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 197078 TGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCC 197137 |||| || | |||||||| || | ||| | |||||| ||| | | ||| ||| | Sbjct 9452 TGTCTGGGTGATAACAGGCTAGCAGGAAGCCTCCGTAGAGTCCTGCCCGCTTCCCCTTGC 9511 Query 197138 CGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTT 197197 || |||| |||| |||||||| ||||||||||| | |||||| |||| ||| || | Sbjct 9512 CGAAATAGCCCCCGACCACCACCAGGTCCAGAGTGTCACCCACCCCGTCCAGGTAGTCCT 9571 Query 197198 TCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCA 197257 ||||||| || |||||| | | |||| ||| |||||||||||||| || | |||| Sbjct 9572 TCTTCAGCTTCAGCCAGTTCCGGGATCGCTTAGCAATCTCGTAGGTGGCATCGCTCTCCA 9631 Query 197258 GGGTCTTGATCATCAATCCCTCGCA 197282 | ||||| | |||||| || || || Sbjct 9632 GCGTCTTCACCATCAACCCTTCACA 9656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676210463805600