Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq907 102 2e-16 seq254 102 2e-16 >seq907 Length=523837 Score = 102 bits (112), Expect = 2e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 ||||| ||||| |||| |||| | |||||||| |||||||||||||||||||||||| Sbjct 396422 ACCTCATCCTTACTGGTGTACTCGACAATCTCTGTGCAGAGGTTGCTGCACTTGATGGTC 396363 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCG 221851 || |||| | ||||| |||||| ||| || ||||| || | ||| | ||| | Sbjct 396362 CCAAGGTTCTGCTGATTGCTCTTGCGGTTGCAGGCATCCTTATATAACATGTACGGAACA 396303 Query 221852 CCAGTCTCCAGCTGAGCCACCAGAAT 221877 |||||||| | ||| || |||| || Sbjct 396302 CCAGTCTCTACCTGGGCGTCCAGGAT 396277 >seq254 Length=3229631 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 |||||||| || ||| | ||||| | || || ||||| || |||||||| | Sbjct 2115965 GCCATCGAAACAATGCCCTGTGTCAAGCGCAAAGCTGATTGGGCATTGCAGTGGATCGCC 2115906 Query 25855 AGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTT 25914 ||| ||| ||| |||||||| ||||| | ||||| || ||||| || ||||| ||||| Sbjct 2115905 AGCGAGACCGCAACGTTTGGTGAGCGTATTGTAGCGTTCGCTGCAGTCGAGGGTATCTTC 2115846 Query 25915 TTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCT 25973 ||| |||| || || ||||||||||||||||| || || ||||||||| || Sbjct 2115845 TTCTCCGGTAGCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGACT 2115787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928132259932800