Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq27002 407 8e-109 >seq27002 Length=7239 Score = 407 bits (450), Expect = 8e-109 Identities = 345/425 (81%), Gaps = 0/425 (0%) Strand=Plus/Plus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 || ||||||||||||||||| ||||||||||| ||||||||| | || | ||| Sbjct 885 GCGATCAACTGGAACCGCGTGCAGGACGACAAGGACGCCGAGGTCTGGGATCGCCTCACC 944 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 |||||||||||| || |||||| | || || ||||||||||||||| | ||| ||| Sbjct 945 GGCAACTTCTGGCTCCCCGAGAAGGTGCCGGTGTCCAACGACATCCCGTCGTGGCAGACG 1004 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 || || || | ||| | ||||| |||||||| ||||||||||||||| |||||||| Sbjct 1005 CTCACCGAACACGAGAAGCAGCTCACCATGCGGGTGTTCACCGGCCTGACGCTGCTCGAC 1064 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 || ||||||||||||||||| || ||| || ||||| ||||||||||| ||||||||| Sbjct 1065 ACCATCCAGGGCACCGTGGGCGCCGTGTCGCTCATCCCCGACGCGATCACCCCGCACGAG 1124 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 |||||||||||||| ||||||||||||||||||||||||||||| ||| |||| Sbjct 1125 GAGGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGTCCTACTCGTCG 1184 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 |||||||| || |||||||| | ||| ||||||| ||||||||||||||||||||| Sbjct 1185 ATCTTCTCCACCCTGTGCTCCACGCGGGACATCGACGACGCGTTCCGCTGGTCGGAGGAG 1244 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 || || |||||||| |||||||| |||||| |||||||||||||||| ||||| ||| Sbjct 1245 AACCCCAACCTGCAGCGCAAGGCGTCCATCGTCATGGACTACTACCAGGGCGACGACCCG 1304 Query 59686 CTGAA 59690 || || Sbjct 1305 CTCAA 1309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258737533218120