Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq9379 136 2e-27 >seq9379 Length=20973 Score = 136 bits (150), Expect = 2e-27 Identities = 192/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 65591 AAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAG 65650 ||||| |||| |||||||||||| || |||||||| |||| ||||||| || |||| Sbjct 17417 AAGGCGTTGAAGTTCTACGCCTCCGTACGCATGGACATCCGCCGCATCGAAACGCTGAAG 17476 Query 65651 GAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCC 65710 || ||| || || || |||||||| ||||| || ||||| |||||||||||| || | Sbjct 17477 GACGGCACGGACGCGGTGGGCAACCGGACCCGCGTCAAGGTGGTCAAGAACAAGGTGTCG 17536 Query 65711 CCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC 65770 ||||| | | || |||||| | || ||||||| |||||||| |||| | Sbjct 17537 CCGCCCTTCAAGCAGGCGGAGTTCGACATCCTGTACGGCAAGGGCATCAGCAAGGAGGGC 17596 Query 65771 GAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAG 65830 || ||||| ||| |||| ||| || | ||| ||||| ||| | ||||||| Sbjct 17597 TCGCTGATCGACATGGGCGTGGAGCACGGTTTCGTGCGCAAGTCCGGCTCGTGGTTCACC 17656 Query 65831 TACGGGGACAAGAACGTCGCTCAGGGCAAG 65860 |||| || | | | ||| ||||||||| Sbjct 17657 TACGAGGGCGATCAGCTCGGCCAGGGCAAG 17686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242049224529290