Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_022085.1 Length=76483 Score E Sequences producing significant alignments: (Bits) Value seq9379 140 2e-28 >seq9379 Length=20973 Score = 140 bits (154), Expect = 2e-28 Identities = 193/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 66673 AAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAG 66732 ||||| |||| |||||||||||| || |||||||| |||| ||||||| || |||| Sbjct 17417 AAGGCGTTGAAGTTCTACGCCTCCGTACGCATGGACATCCGCCGCATCGAAACGCTGAAG 17476 Query 66733 GAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCC 66792 || ||| || || || |||||||| ||||| || ||||| |||||||||||| || | Sbjct 17477 GACGGCACGGACGCGGTGGGCAACCGGACCCGCGTCAAGGTGGTCAAGAACAAGGTGTCG 17536 Query 66793 CCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTC 66852 ||||| | | || |||||| | || ||||||| |||||||| |||| | Sbjct 17537 CCGCCCTTCAAGCAGGCGGAGTTCGACATCCTGTACGGCAAGGGCATCAGCAAGGAGGGC 17596 Query 66853 GAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAG 66912 || ||||| ||| |||| ||| || | ||| ||||| ||| | ||||||| Sbjct 17597 TCGCTGATCGACATGGGCGTGGAGCACGGTTTCGTGCGCAAGTCCGGCTCGTGGTTCACC 17656 Query 66913 TACGGGGACAAGAACGTCGCCCAGGGCAAG 66942 |||| || | | | ||| |||||||||| Sbjct 17657 TACGAGGGCGATCAGCTCGGCCAGGGCAAG 17686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244437836637080