Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_022972.2 Length=37372 Score E Sequences producing significant alignments: (Bits) Value seq46235 86.0 1e-12 >seq46235 Length=1443 Score = 86.0 bits (94), Expect = 1e-12 Identities = 124/170 (73%), Gaps = 14/170 (8%) Strand=Plus/Plus Query 33131 GGCCGAACAGTCCGTGCTCGGGGCCATGCTCATCAGCAGGGAAGCCATCCCGGATATCGC 33190 |||||| ||| ||| ||||| ||||||||||| |||| | | |||||| || |||| Sbjct 270 GGCCGAGCAGAGCGTCCTCGGCGCCATGCTCATGAGCAAGCAGGCCATC---GACGTCGC 326 Query 33191 ---GGACATCCTCGACGGCGGAGACTTCTACCGGCCCGCACACGAGACCATCTACCGGAC 33247 ||||| |||||||| | ||||||||||| || || |||||| | ||| | ||| Sbjct 327 CGGCGACATGCTCGACGGTCGCGACTTCTACCGCCCGGCCCACGAGCTCGTCTTCGAGAC 386 Query 33248 CATCCTCGACGTC-CACGCTG--CG-GGCAACCCCGTCGACGCCATCACC 33293 ||| ||||| | ||| | || ||| | || | ||||||||||||| Sbjct 387 GATC----ACGTCGCTCGCCGGTCGCGGCGAGCCGGCCGACGCCATCACC 432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119381734871960