Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq6092 116 1e-21 seq4588 86.0 3e-12 >seq6092 Length=27990 Score = 116 bits (128), Expect = 1e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 30940 TCACCATCCTCGTTCACGCCACTCTTCGAGGTGGGGGCGTTCGGTGCCCAACGTGGTGTC 30999 |||||| || || || ||||| || ||||||| ||||| |||| || | ||||||||| Sbjct 4815 TCACCACCCGCGCTCGCGCCATTCCCCGAGGTGCGGGCGCTCGGCACCGAGCGTGGTGTC 4756 Query 31000 GTCGCCGTGCCCGGGATAGACGACCGTGCGGTCGTCGAAGCGATCAAACACCTTCGTTTC 31059 | |||||| |||||||||||||| ||| ||||||||| || | |||| ||| || || Sbjct 4755 CTTGCCGTGGCCGGGATAGACGACGGTGGAGTCGTCGAACCGCGCGAACAACTTGGTCTC 4696 Query 31060 AAGGTCGTTCATCAGCGAGTTGAA 31083 | |||||||| || ||| | ||| Sbjct 4695 GACGTCGTTCAGCAACGACTCGAA 4672 >seq4588 Length=49850 Score = 86.0 bits (94), Expect = 3e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCCTG 651 ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| Sbjct 39124 TAGCTCAATTGGTAGAGCAACGGTCTCCAAAACCGTAGGTTGCAGGTTCAAGTCCTG 39068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201295728794640