Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_024329.1 Length=39425 Score E Sequences producing significant alignments: (Bits) Value seq811 84.2 6e-12 >seq811 Length=1020237 Score = 84.2 bits (92), Expect = 6e-12 Identities = 144/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 14746 CAACTGGTGGTGATGCTAATAGAAAAGCATTAAATATTCATAATGCTGT--TGTTATTAA 14803 ||||||||||||| | ||| | |||||||||||||| ||| ||||||| | || | Sbjct 844239 CAACTGGTGGTGACCCAAATCGCAAAGCATTAAATATACATCATGCTGTAATAGTAACAG 844180 Query 14804 TCAAGCCTTTTTAAATGCAGTTAGATATGATGAAAGCTGGTATTTAATTAACCCAGATAG 14863 ||| ||| | | || ||| | ||||| || ||| ||||||| | ||| ||| Sbjct 844179 ATAAG--TTTATGCAAGCTGTTGAAGATGATCAAGAATGGGATTTAATAAGCCCTCATAA 844122 Query 14864 TAATGATGTGGTAGATAAAGTAATTGCTCGTGATTTATATAAACAAATCTTAACAACAAG 14923 |||| | || | | ||||| || || ||| ||| | |||| |||||| |||| Sbjct 844121 TAATAAAGTTATTTCAACAGTAAAAGCACGGGATATATGGATTAAAATATTAACAGCAAG 844062 Query 14924 ACACCAAACTGGTGAGCCTTATATTAT 14950 | ||||||| || ||||||||||| Sbjct 844061 AATTGAAACTGGAGAACCTTATATTAT 844035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125946547152780