Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2384 140 4e-28 >seq2384 Length=141650 Score = 140 bits (154), Expect = 4e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || |||| || || || | |||| |||||||||| | |||||||| |||||||| Sbjct 71173 CTTGAGATCGGTGACATGTGCTATCATGCAGGTGAGCAGAGCATAGCTGGCAATGTTGAA 71232 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || ||||||||||||||| | |||| |||||||| ||| || |||| ||||| Sbjct 71233 GGGCACTCCCAGGCCCATGTCCGCAGACCGCTGGTACAACTGACAGCTGAGCGTACCGTC 71292 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 ||||| || ||||| |||| |||||| || ||||| ||||| |||| ||| | Sbjct 71293 AGCCACATAGAACTGTGCCAGGCAGTGGCAGGGTGGCAGTGCCATTTGTGGCACATCCAC 71352 Query 147162 GGGGTTCCAGGC 147173 |||||||| || Sbjct 71353 AGGGTTCCACGC 71364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583040391768000