Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_026606.1 Length=71200 Score E Sequences producing significant alignments: (Bits) Value seq49429 145 3e-30 >seq49429 Length=1101 Score = 145 bits (160), Expect = 3e-30 Identities = 215/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 62775 CCGAATTACGGTTCACGCCGTCCGGCAGCCCGGTGGCCAACTTCACCATTGCCAGCACCC 62834 ||||| | || ||||| || |||| |||| || ||||||||| | || ||| | Sbjct 1 CCGAACTTCGATTCACCCCCGCCGGTGCGGCGGTCGCGAACTTCACCGTCGCGTCCACTC 60 Query 62835 CGCGCACGTTCGACCGGCAGAGCAACGAGTGGAAGGACGGGGAAACCCTGTTTTTGCGCG 62894 | ||||| ||||| || |||| |||||||||||||||||| || | ||||| | ||| Sbjct 61 CCCGCACCTTCGATCGCCAGACCAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCGCT 120 Query 62895 CGAGTATCTGGCGCGACCCCGCGGAGAACGTGGCAGAGTCCCTGACCAAGGGCATGCGCG 62954 | |||||||| || | ||||||||||| || ||||||||||| ||| || | Sbjct 121 GCAACATCTGGCGTGAGGCAGCGGAGAACGTCGCCGAGTCCCTGACTCGCGGCGCACGGG 180 Query 62955 TGATTGTGTCCGGGCGGCTCAAGTCCCGCAGCTACGAGACCAAGGAAGGCGAAAAGCGCA 63014 || | || | || |||||| | || || |||||| || || || ||||||| Sbjct 181 TGGTCGTCACGGGCCGGCTCCGGCAGCGTTCCTTCGAGACGCGTGAGGGTGAGAAGCGCA 240 Query 63015 CGGTCATTGAGCTTGAGGTGGACGAAATTGGCCCGTCTTTGCGCTATGCCAACGCCAAGG 63074 | ||| | || || ||||| ||||| | ||||| || | ||||| || | ||||||| Sbjct 241 CTGTCGTCGAACTCGAGGTCGACGAGGTCGGCCCTTCGCTCCGCTACGCGACGGCCAAGG 300 Query 63075 TGAAC 63079 | ||| Sbjct 301 TCAAC 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227544881127770