Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq4154 102 1e-16 seq811 84.2 3e-11 >seq4154 Length=96037 Score = 102 bits (112), Expect = 1e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 18755 GGGGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAAG 18814 |||| ||||||||||||||||||||||| ||||||||||||| || |||||| ||||||| Sbjct 41816 GGGGGTGTAGCTCAGTTGGTTAGAGCGCATGCCTGTCACGCATGAGGTCGTGAGTTCAAG 41875 Query 18815 TCCCATCAATCCCG 18828 || ||||| ||||| Sbjct 41876 TCTCATCACTCCCG 41889 >seq811 Length=1020237 Score = 84.2 bits (92), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 154264 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTTGGTTCGAGTCCAAC 154323 ||||||||||||||||||||||| ||||||||||| || |||||| ||||||| ||| || Sbjct 741881 GTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTAGGTTCGAATCCTAC 741940 Query 154324 C 154324 | Sbjct 741941 C 741941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605544714885600