Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_028823.1 Length=58985 Score E Sequences producing significant alignments: (Bits) Value seq5352 82.4 3e-11 >seq5352 Length=46575 Score = 82.4 bits (90), Expect = 3e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 44754 CTATGACACCGAGTTTCTCGAAGACGGCCGCACGATCGAGCTGATCTCGATTGGCATCGT 44813 ||| ||| |||||| |||| || || ||||||||||| ||| |||| || |||||||| Sbjct 33519 CTACGACTGCGAGTTCATCGAGGATGGTCGCACGATCGATCTGGTCTCCATCGGCATCGT 33578 Query 44814 CTGTGAGGACGGCCGCGAGTACTACGCCGT 44843 | ||||||||||| || |||||||| || Sbjct 33579 CGCCGAGGACGGCCGTGAATACTACGCGGT 33608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188492932059180