Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2384 122 8e-23 >seq2384 Length=141650 Score = 122 bits (134), Expect = 8e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||| || |||||| | ||||||||||| || || ||||||||||| ||||| || | Sbjct 71185 GACATGTGCTATCATGCAGGTGAGCAGAGCATAGCTGGCAATGTTGAAGGGCACTCCCAG 71244 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||| | || || || || | ||| ||| ||| || | || || ||||| Sbjct 71245 GCCCATGTCCGCAGACCGCTGGTACAACTGACAGCTGAGCGTACCGTCAGCCACATAGAA 71304 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 || ||| |||||| || || || ||||| | || | |||| ||||||||||| Sbjct 71305 CTGTGCCAGGCAGTGGCAGGGTGGCAGTGCCATTTGTGGCACATCCACAGGGTTCCACGC 71364 Query 6796 GCACATCACGATCCTTCTGTCATCAGG 6822 ||||||| ||||| | ||||||||| Sbjct 71365 ACACATCAGTATCCTGCGGTCATCAGG 71391 Score = 122 bits (134), Expect = 8e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 ||||||||| | ||||| ||||||| ||||||||||| |||| | || | ||||| Sbjct 71391 CCTGATGACCGCAGGATACTGATGTGTGCGTGGAACCCTGTGGATGTGCCACAAATGGCA 71332 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642 || || || |||||| ||| || ||||| || || | || ||| ||| ||| Sbjct 71331 CTGCCACCCTGCCACTGCCTGGCACAGTTCTATGTGGCTGACGGTACGCTCAGCTGTCAG 71272 Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 | || || || || | |||||||| | || ||||| ||||||||||| || || ||| Sbjct 71271 TTGTACCAGCGGTCTGCGGACATGGGCCTGGGAGTGCCCTTCAACATTGCCAGCTATGCT 71212 Query 34703 CTGCTCACGTACATGATCGCTCATGTC 34729 |||||||| | |||||| || |||||| Sbjct 71211 CTGCTCACCTGCATGATAGCACATGTC 71185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447918526706400