Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_030913.1 Length=58308 Score E Sequences producing significant alignments: (Bits) Value seq6786 82.4 3e-11 >seq6786 Length=20090 Score = 82.4 bits (90), Expect = 3e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 38711 CGAACCGGTGGCGCAACGTGTGCATCGTCCAGCCGCCCGGCAGCGCCTCCGCGCAC-AGC 38769 |||| |||||||||| || |||||||||| ||| ||||||| | |||| || | | Sbjct 15679 CGAAGCGGTGGCGCAGCGCGTGCATCGTCACGCCCTCCGGCAG-GAGGCCGCCGACGATC 15737 Query 38770 GTTCCGACCCACCGCGGCGACAGGTGACCACCGTCGTTGCCCGGGAAGAGGTAGCCGGTC 38829 | ||||||||||| || |||||||| || ||| | ||| ||||| ||||| ||| | Sbjct 15738 TTGCCGACCCACCGAGGGGACAGGTGGCCGCCGGCCGCGCCGGGGAACAGGTACCCGCCC 15797 Query 38830 CGCG 38833 |||| Sbjct 15798 CGCG 15801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 186328110863800